CDS
| Accession Number | TCMCG057C01797 |
| gbkey | CDS |
| Protein Id | XP_018451578.1 |
| Location | join(7651612..7651792,7652108..7652257,7652366..7652533,7652627..7652779,7652876..7653028,7653257..7653421,7653519..7653632,7653718..7653904,7653987..7654179,7654273..7654389) |
| Gene | LOC108822852 |
| GeneID | 108822852 |
| Organism | Raphanus sativus |
Protein
| Length | 526aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018596076.1 |
| Definition | PREDICTED: tip elongation aberrant protein 1 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Galactose oxidase kelch, beta-propeller (InterPro IPR011043), Kelch repeat type 1 (InterPro IPR006652), Kelch repeat type 2 (InterPro IPR011498), Kelch-type beta propeller (InterPro IPR015915) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K20285
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAGGTGGGAAAGGGTCCGACAACAACAGCAACAAGTGGGTCTGGGTGAGTCGTGTTACGGGCCCGGGAAGAGGTGGGGACACACTTGTAACGCCATTAAAGGAGGCAGCTTTCTCTACGTGTTTGGTGGCTATGGCAAAGATAATTGCCAAACCAATCAAGTCCATGTCTTCGACGCTGCAAAGCAGATATGGACTCAACCAATAATCAGTGGAACACCTCCTCCTCCTAGGGACAGTCACACCTGTACAACAGTAGGTGACAATCTTTTGGTGTTTGGTGGTACTGATGGAACTAAACCTCTCAATGATCTGTACATTCTAGACACTTCTTCACATACTTGGAAGTGTCAGAGTGTTAGGGGAGAGGGACCTGAGGCAAGAGAAGGTCACAGCGCCACTCTTGTTGGTAGAAGGCTTTTTGTATTTGGTGGCTGTGGGAAATCTTCTGATATTAATGACGAAATCTATTATAATGACCTTTACGTGCTTAATACAGAGACTTATGTGTGGAAACGTGCTGCTACGATTGGGAATCCTCCATCTGCGCGAGATAGCCACACTTGCTCATCGTGGAAGAACAAAATCGTTGTTATAGGTGGTGAAGATGGACATGACTATTATCTGTCTGATGTTCATATCCTTGATACAGATACATTCGTATGGAAAGAGTTGAATACTTCAGGCCAGTTGTTGACACCTCGAGCTGGTCATGTGACTGTCTCACTTGGGAGAAACTTATATGTGTTTGGAGGGTTTACAGATGCTCAGAATCTTTACGATGATCTATATGTGCTTGATGTCGAGACGTGTGTGTGGTCAAAGGTTCTCACCATGGGAGAAGGGCCATCTGCTAGGTTCTCTTCTGCAGGGGCTTGTTTAGATCCTCACAAAGCCGGATTTCTCGTCTTTGTTGGTGGCTGCAATAAAAGTCTCGAGGCACTGGATGACATGTTCTACTTACACACAGGACTTGGATATGATGCAAGGCTTGATCAGAGTGTAGGGAGCATGTCTCTAAAGAAGCAACTGAAGCTGAAATGCCAAGAACAAAGTCATGCAAGTTCCTTATACGATAATCAAGGAAGAGGGAATTTCGGTTTGAACACTGGCCAATTTGATCAGGGAAAGATGGTGTTTCAGGCCAGGGTAACCGAGACTTTCCCAGTTGGTTACAGTATAGAAACAATGATAAATGGAAAAGTGCTTCGTGGCGTTTTGTTTTCAACTAAGCAGAGCTCCGTTCTGCCCACTGATCAAAGCTTTAGTAGAAAGAGGCCAGCTATGTCGAATGGTGATCAGGCTAACACATCAAAGATACCAAGAACTTTGAGCATGGATCAAACTGGTGCTACTGAAGCCAAAGATCCTCCATCAAACGGCGTGGAGGGTGGTATTGGTCTCATCAATCCTCTGGATGTTAACATAAACACAACCGCCGTGGTGGCACCTCAGCTCGATATGGGCACTGTGAATGCAGCTCCAGCTTCAGTTGCTCAAACAGATGAAGCTTCTTTAGAATCTAGAAATGCCGTATCGATTGATGTTGAAGCTAGCAAGACCGGACCTGGAGAGTCATAG |
| Protein: MRWERVRQQQQQVGLGESCYGPGKRWGHTCNAIKGGSFLYVFGGYGKDNCQTNQVHVFDAAKQIWTQPIISGTPPPPRDSHTCTTVGDNLLVFGGTDGTKPLNDLYILDTSSHTWKCQSVRGEGPEAREGHSATLVGRRLFVFGGCGKSSDINDEIYYNDLYVLNTETYVWKRAATIGNPPSARDSHTCSSWKNKIVVIGGEDGHDYYLSDVHILDTDTFVWKELNTSGQLLTPRAGHVTVSLGRNLYVFGGFTDAQNLYDDLYVLDVETCVWSKVLTMGEGPSARFSSAGACLDPHKAGFLVFVGGCNKSLEALDDMFYLHTGLGYDARLDQSVGSMSLKKQLKLKCQEQSHASSLYDNQGRGNFGLNTGQFDQGKMVFQARVTETFPVGYSIETMINGKVLRGVLFSTKQSSVLPTDQSFSRKRPAMSNGDQANTSKIPRTLSMDQTGATEAKDPPSNGVEGGIGLINPLDVNINTTAVVAPQLDMGTVNAAPASVAQTDEASLESRNAVSIDVEASKTGPGES |